Table of Contents
March 10, 2005
Volume 48, Issue 5
Pages 1297-1684
About the Cover: Interaction of the β-L-enantiomer of a 4'-C-ethynyl-2',3'-dideoxynucleoside analogue (ent-14-TP) at the active site of HIV reverse transcriptase (Siddiqui, M. A.; et al. J. Med. Chem. 2004, 47, 5041-5048).
Perspective
New Approaches toward Anti-HIV Chemotherapy
Erik De Clercq
pp 1297–1313Publication Date (Web): February 12, 2005 (Perspective)
DOI: 10.1021/jm040158k
Letters
Development and Preliminary Optimization of Indole-N-Acetamide Inhibitors of Hepatitis C Virus NS5B Polymerase
Steven Harper, Barbara Pacini, Salvatore Avolio, Marcello Di Filippo, Giovanni Migliaccio, Ralph Laufer, Raffaele De Francesco, Michael Rowley, and Frank Narjes
pp 1314–1317Publication Date (Web): February 8, 2005 (Letter)
DOI: 10.1021/jm049122i
Identification of 2-(4-Benzyloxyphenyl)-N- [1-(2-pyrrolidin-1-yl-ethyl)-1H-indazol-6-yl]acetamide, an Orally Efficacious Melanin-Concentrating Hormone Receptor 1 Antagonist for the Treatment of Obesity
Andrew J. Souers, Ju Gao, Michael Brune, Eugene Bush, Dariusz Wodka, Anil Vasudevan, Andrew S. Judd, Mathew Mulhern, Sevan Brodjian, Brian Dayton, Robin Shapiro, Lisa E. Hernandez, Kennan C. Marsh, Hing L. Sham, Christine A. Collins, and Philip R. Kym
pp 1318–1321Publication Date (Web): February 15, 2005 (Letter)
DOI: 10.1021/jm0490890
Articles
Synthesis of NO-Donor Bisphosphonates and Their in-Vitro Action on Bone Resorption
Loretta Lazzarato, Barbara Rolando, Marco L. Lolli, Gian Cesare Tron, Roberta Fruttero, Alberto Gasco, Guido Deleide, and Harald L. Guenther
pp 1322–1329Publication Date (Web): February 8, 2005 (Article)
DOI: 10.1021/jm040830d
Solid-Phase Total Synthesis of Kahalalide A and Related Analogues
Line Bourel-Bonnet, Karumanchi V. Rao, Mark T. Hamann, and A. Ganesan
pp 1330–1335Publication Date (Web): February 12, 2005 (Article)
DOI: 10.1021/jm049841x
Synthesis and Biological Evaluation of Meperidine Analogues at Monoamine Transporters
Stacey A. Lomenzo, Jill B. Rhoden, Sari Izenwasser, Dean Wade, Theresa Kopajtic, Jonathan L. Katz, and Mark L. Trudell
pp 1336–1343Publication Date (Web): February 10, 2005 (Article)
DOI: 10.1021/jm0401614
Design, Synthesis, and in Vitro Evaluation of Dipeptide-Based Antibody Minor Groove Binder Conjugates
Scott C. Jeffrey, Michael Y. Torgov, Jamie B. Andreyka, Laura Boddington, Charles G. Cerveny, William A. Denny, Kristine A. Gordon, Darin Gustin, Jennifer Haugen, Toni Kline, Minh T. Nguyen, and Peter D. Senter
pp 1344–1358Publication Date (Web): February 5, 2005 (Article)
DOI: 10.1021/jm040137q
Novel Potent Orally Active Selective VEGFR-2 Tyrosine Kinase Inhibitors: Synthesis, Structure−Activity Relationships, and Antitumor Activities of N-Phenyl-N‘-{4-(4-quinolyloxy)phenyl}ureas
Kazuo Kubo, Toshiyuki Shimizu, Shin-ichi Ohyama, Hideko Murooka, Akemi Iwai, Kazuhide Nakamura, Kazumasa Hasegawa, Yoshiko Kobayashi, Noriko Takahashi, Kazumi Takahashi, Shinichiro Kato, Toshio Izawa, and Toshiyuki Isoe
pp 1359–1366Publication Date (Web): February 15, 2005 (Article)
DOI: 10.1021/jm030427r
Discovery of Functionally Selective 7,8,9,10-Tetrahydro-7,10-ethano-1,2,4-triazolo[3,4-a]phthalazines as GABAA Receptor Agonists at the α3 Subunit
Michael G. N. Russell, Robert W. Carling, John R. Atack, Frances A. Bromidge, Susan M. Cook, Peter Hunt, Catherine Isted, Matt Lucas, Ruth M. McKernan, Andrew Mitchinson, Kevin W. Moore, Robert Narquizian, Alison J. Macaulay, David Thomas, Sally-Anne Thompson, Keith A. Wafford, and José L. Castro
pp 1367–1383Publication Date (Web): February 4, 2005 (Article)
DOI: 10.1021/jm040883v
Design and Synthesis of Melanocortin Peptides with Candidacidal and Anti-TNF-α Properties
Paolo Grieco, Claudia Rossi, Stefano Gatti, Gualtiero Colombo, Andrea Carlin, Ettore Novellino, Teresa Lama, James M. Lipton, and Anna Catania
pp 1384–1388Publication Date (Web): February 2, 2005 (Article)
DOI: 10.1021/jm040890j
Synthesis of Phosphonated Carbocyclic 2‘-Oxa-3‘-aza-nucleosides: Novel Inhibitors of Reverse Transcriptase
Ugo Chiacchio, Emanuela Balestrieri, Beatrice Macchi, Daniela Iannazzo, Anna Piperno, Antonio Rescifina, Roberto Romeo, Monica Saglimbeni, M. Teresa Sciortino, Vincenza Valveri, Antonio Mastino, and Giovanni Romeo
pp 1389–1394Publication Date (Web): February 8, 2005 (Article)
DOI: 10.1021/jm049399i
β-Lactam Screening by Specific Residues of the OmpF Eyelet
Stéphanie Vidal, Jérôme Bredin, Jean-Marie Pagès, and Jacques Barbe
pp 1395–1400Publication Date (Web): February 2, 2005 (Article)
DOI: 10.1021/jm049652e
Synthesis and Biological Evaluation of Novel Naphthocarbazoles as Potential Anticancer Agents
Sylvain Routier, Paul Peixoto, Jean-Yves Mérour, Gérard Coudert, Nathalie Dias, Christian Bailly, Alain Pierré, Stéphane Léonce, and Daniel-Henry Caignard
pp 1401–1413Publication Date (Web): February 12, 2005 (Article)
DOI: 10.1021/jm049213f
Cationic Polysaccharides as Antiprion Agents
Ira Yudovin-Farber, Tony Azzam, Esther Metzer, Albert Taraboulos, and Abraham J. Domb
pp 1414–1420Publication Date (Web): February 12, 2005 (Article)
DOI: 10.1021/jm049378o
N- and C-Terminal Modifications of Nociceptin/Orphanin FQ Generate Highly Potent NOP Receptor Ligands
Remo Guerrini, Girolamo Caló, David G. Lambert, Giacomo Carrá, Marika Arduin, Tim A. Barnes, John McDonald, Daniela Rizzi, Claudio Trapella, Erika Marzola, David J. Rowbotham, Domenico Regoli, and Severo Salvadori
pp 1421–1427Publication Date (Web): February 15, 2005 (Article)
DOI: 10.1021/jm040106v
Nonpolar and Short Side Chain Groups at C-11β of Estradiol Result in Antiestrogens
Jing-xin Zhang, David C. Labaree, and Richard B. Hochberg
pp 1428–1447Publication Date (Web): February 10, 2005 (Article)
DOI: 10.1021/jm049352x
CoMFA and CoMSIA Analyses of Pneumocystis carinii Dihydrofolate Reductase, Toxoplasma gondii Dihydrofolate Reductase, and Rat Liver Dihydrofolate Reductase
Aleem Gangjee and Xin Lin
pp 1448–1469Publication Date (Web): February 15, 2005 (Article)
DOI: 10.1021/jm040153n
Design And Synthesis of a Novel Potent Myelin Basic Protein Epitope 87−99 Cyclic Analogue: Enhanced Stability and Biological Properties of Mimics Render Them a Potentially New Class of Immunomodulators
John Matsoukas, Vasso Apostolopoulos, Hubert Kalbacher, Anna-Maria Papini, Theodore Tselios, Kokona Chatzantoni, Tiziana Biagioli, Francesco Lolli, Spyros Deraos, Panagiotis Papathanassopoulos, Anastassios Troganis, Efthimia Mantzourani, Thomas Mavromoustakos, and Athanasia Mouzaki
pp 1470–1480Publication Date (Web): February 15, 2005 (Article)
DOI: 10.1021/jm040849g
CHMIS-C: A Comprehensive Herbal Medicine Information System for Cancer
Xueliang Fang, Lei Shao, Hui Zhang, and Shaomeng Wang
pp 1481–1488Publication Date (Web): July 23, 2008 (Article)
DOI: 10.1021/jm049838d
A Shape-Based 3-D Scaffold Hopping Method and Its Application to a Bacterial Protein−Protein Interaction
Thomas S. Rush III, J. Andrew Grant, Lidia Mosyak, and Anthony Nicholls
pp 1489–1495Publication Date (Web): February 10, 2005 (Article)
DOI: 10.1021/jm040163o
Dynamic Receptor-Based Pharmacophore Model Development and Its Application in Designing Novel HIV-1 Integrase Inhibitors
Jinxia Deng, Keun Woo Lee, Tino Sanchez, Meng Cui, Nouri Neamati, and James M. Briggs
pp 1496–1505Publication Date (Web): February 15, 2005 (Article)
DOI: 10.1021/jm049410e
NMR Studies Reveal Structural Differences between the Gallium and Yttrium Complexes of DOTA-d-Phe1-Tyr3-octreotide
Mandar V. Deshmukh, Georg Voll, Angelika Kühlewein, Helmut Mäcke, Jörg Schmitt, Horst Kessler, and Gerd Gemmecker
pp 1506–1514Publication Date (Web): February 10, 2005 (Article)
DOI: 10.1021/jm0496335
Novel Ligands for the Chemokine Receptor-3 (CCR3): A Receptor-Modeling Study Based on 5D-QSAR
Angelo Vedani, Max Dobler, Horst Dollinger, Kai-Malte Hasselbach, Franz Birke, and Markus A. Lill
pp 1515–1527Publication Date (Web): February 11, 2005 (Article)
DOI: 10.1021/jm040827u
Design and Biological Evaluation of Linear and Cyclic Phosphopeptide Ligands of the N-Terminal SH2 Domain of Protein Tyrosine Phosphatase SHP-1
Diana Imhof, Karin Wieligmann, Kornelia Hampel, Doreen Nothmann, Mohammad S. Zoda, Dirk Schmidt-Arras, Martin Zacharias, Frank D. Böhmer, and Siegmund Reissmann
pp 1528–1539Publication Date (Web): February 9, 2005 (Article)
DOI: 10.1021/jm049151t
Rational Design, Synthesis, and Structure−Activity Relationships of Aryltriazoles as Novel Corticotropin-Releasing Factor-1 Receptor Antagonists
Richard F. Lowe, Jodene Nelson, Trunghau N. Dang, Paul D. Crowe, Anil Pahuja, James R. McCarthy, Dimitri E. Grigoriadis, Paul Conlon, John Saunders, Chen Chen,Chen Chen, Thomas Szabo, Ta Kung Chen, and Haig Bozigian
pp 1540–1549Publication Date (Web): February 4, 2005 (Article)
DOI: 10.1021/jm049339c
Synthesis, Biological Evaluation, and Molecular Modeling of Ribose-Modified Adenosine Analogues as Adenosine Receptor Agonists
Loredana Cappellacci, Palmarisa Franchetti, Michela Pasqualini, Riccardo Petrelli, Patrizia Vita, Antonio Lavecchia, Ettore Novellino, Barbara Costa, Claudia Martini, Karl-Norbert Klotz, and Mario Grifantini
pp 1550–1562Publication Date (Web): February 5, 2005 (Article)
DOI: 10.1021/jm049408n
Synthesis and Evaluation of (Pyridylmethylene)tetrahydronaphthalenes/-indanes and Structurally Modified Derivatives: Potent and Selective Inhibitors of Aldosterone Synthase
Sarah Ulmschneider, Ursula Müller-Vieira, Christian D. Klein, Iris Antes, Thomas Lengauer, and Rolf W. Hartmann
pp 1563–1575Publication Date (Web): February 10, 2005 (Article)
DOI: 10.1021/jm0492397
Bisaryloxime Ethers as Potent Inhibitors of Transthyretin Amyloid Fibril Formation
Steven M. Johnson, H. Michael Petrassi, Satheesh K. Palaninathan, Nilofar N. Mohamedmohaideen, Hans E. Purkey, Christopher Nichols, Kyle P. Chiang, Traci Walkup, James C. Sacchettini, K. Barry Sharpless, and Jeffery W. Kelly
pp 1576–1587Publication Date (Web): February 8, 2005 (Article)
DOI: 10.1021/jm049274d
Synthesis, Characterization, and Comparative in Vitro Cytotoxicity Studies of Platinum(II), Palladium(II), and Gold(III) Methylsarcosinedithiocarbamate Complexes
Lorena Giovagnini, Luca Ronconi, Donatella Aldinucci, Debora Lorenzon, Sergio Sitran, and Dolores Fregona
pp 1588–1595Publication Date (Web): February 9, 2005 (Article)
DOI: 10.1021/jm049191x
Structure-Based Design, Synthesis, and Study of Potent Inhibitors of β-Ketoacyl-acyl Carrier Protein Synthase III as Potential Antimicrobial Agents
Zhe Nie, Carin Perretta, Jia Lu, Ying Su, Stephen Margosiak, Ketan S. Gajiwala, Joseph Cortez, Victor Nikulin, Kraig M. Yager, Krzysztof Appelt, and Shaosong Chu
pp 1596–1609Publication Date (Web): February 12, 2005 (Article)
DOI: 10.1021/jm049141s
Discovery and Evaluation of 2-Anilino-5-aryloxazoles as a Novel Class of VEGFR2 Kinase Inhibitors
Philip A. Harris, Mui Cheung, Robert N. Hunter III, Matthew L. Brown, James M. Veal, Robert T. Nolte, Liping Wang, Wendy Liu, Renae M. Crosby, Jennifer H. Johnson, Andrea H. Epperly, Rakesh Kumar, Deirdre K. Luttrell, and Jeffrey A. Stafford
pp 1610–1619Publication Date (Web): February 9, 2005 (Article)
DOI: 10.1021/jm049538w
3D-QSAR Comparative Molecular Field Analysis on Opioid Receptor Antagonists: Pooling Data from Different Studies
Youyi Peng, Susan M. Keenan, Qiang Zhang, Vladyslav Kholodovych, and William J. Welsh
pp 1620–1629Publication Date (Web): February 9, 2005 (Article)
DOI: 10.1021/jm049117e
Force Field Design and Molecular Dynamics Simulations of the Carbapenem- and Cephamycin-Resistant Dinuclear Zinc Metallo-β-lactamase from Bacteroides fragilis and Its Complex with a Biphenyl Tetrazole Inhibitor
Hwangseo Park and Kenneth M. Merz, Jr.
pp 1630–1637Publication Date (Web): February 10, 2005 (Article)
DOI: 10.1021/jm0491290
A General Method for Exploiting QSAR Models in Lead Optimization
Richard A. Lewis
pp 1638–1648Publication Date (Web): February 11, 2005 (Article)
DOI: 10.1021/jm049228d
Discovery of a Novel Class of Reversible Non-Peptide Caspase Inhibitors via a Structure-Based Approach
Roberto Fattorusso, Dawoon Jung, Kevin J. Crowell, Martino Forino, and Maurizio Pellecchia
pp 1649–1656Publication Date (Web): February 15, 2005 (Article)
DOI: 10.1021/jm0493212
Searching for a Reliable Orientation of Ligands in Their Binding Site: Comparison between a Structure-Based (Glide) and a Ligand-Based (FIGO) Approach in the Case Study of PDE4 Inhibitors
Paola Gratteri, Claudia Bonaccini, and Fabrizio Melani
pp 1657–1665Publication Date (Web): February 12, 2005 (Article)
DOI: 10.1021/jm049289b
Brief Articles
Structure of a Synthetic Fragment of the LALF Protein When Bound to Lipopolysaccharide
Primož Pristovšek, Krisztina Fehér, László Szilágyi, and Jurka Kidrič
pp 1666–1670Publication Date (Web): February 12, 2005 (Brief Article)
DOI: 10.1021/jm049217k
Copper(II) and Cobalt(III) Pyridoxal Thiosemicarbazone Complexes with Nitroprusside as Counterion: Syntheses, Electronic Properties, and Antileukemic Activity
Marisa Belicchi-Ferrari, Franco Bisceglie, Claudio Casoli, Stéphanie Durot, Irène Morgenstern-Badarau, Giorgio Pelosi, Elisabetta Pilotti, Silvana Pinelli, and Pieralberto Tarasconi
pp 1671–1675Publication Date (Web): February 12, 2005 (Brief Article)
DOI: 10.1021/jm049529n
Major Effect of Pyrrolic N-Benzylation in Norbinaltorphimine, the Selective κ-Opioid Receptor Antagonist
Cédric Chauvignac, Carl N. Miller, Sanjay K. Srivastava, John W. Lewis, Stephen M. Husbands, and John R. Traynor
pp 1676–1679Publication Date (Web): February 9, 2005 (Brief Article)
DOI: 10.1021/jm049172n
Identification of Small Molecule Chemical Inhibitors of the Collagen-Specific Chaperone Hsp47
Christy A. Thomson, Helen M. Atkinson, and Vettai S. Ananthanarayanan
pp 1680–1684Publication Date (Web): February 11, 2005 (Brief Article)
DOI: 10.1021/jm049148+